Aliases : PSBW
Description : component *(PsbW) of PS-II complex & original description: CDS=161-562
Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0101.g019755 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g30138 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene48046.t1 | PSBW, Aspi01Gene48046 | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08641 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g20782 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g00627 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04368 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000743001 | PSBW | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g56680.2 | PSBW, LOC_Os01g56680 | component PsbW of PS-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03716 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431532g0010 | PSBW | component PsbW of PS-II complex | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g20236 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20237 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23251 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g31677 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06296 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01488 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g23538 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24382 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027386_P002 | PSBW, Zm00001e027386 | component PsbW of PS-II complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | Interproscan |
| CC | GO:0009523 | photosystem II | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| No external refs found! |
