Sacu_v1.1_s0104.g020125

Description : transcription factor *(DOF) & original description: CDS=124-2595

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0104.g020125
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g075098	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06428	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11555	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39186	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g27118	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28487.t1	Aspi01Gene28487	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene44459.t1	Aspi01Gene44459	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.04	OrthoFinder output from all 47 species
Ceric.09G055200.1	TMO6, Ceric.09G055200	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.14G083700.1	OBP4, Ceric.14G083700	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.26G037300.1	TMO6, Ceric.26G037300	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G015700.1	TMO6, Ceric.31G015700	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Ehy_g13892	OBP1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Len_g10091	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Nbi_g38953	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33176	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06642	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19390	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g29329	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g29376	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g43089	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077960.3.1	TMO6, Solyc02g077960	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e005785_P001	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e012437_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e035892_P001	CDF2, Zm00001e035892	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0009063	amino acid catabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901606	alpha-amino acid catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	217	273

External Links

No external refs found!

Sacu_v1.1_s0104.g020125

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation