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  5. Sacu_v1.1_s0109.g020579

Sacu_v1.1_s0109.g020579


Description : bHLH-type transcription factor & original description: CDS=1-1245


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020579

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Adi_g019810 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020388 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31652 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33297 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09875 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19229 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19713 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36020 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030589 No alias bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.20G064100.1 Ceric.20G064100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g42479 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10027 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_196213g0010 SCRM2, ICE2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_196775g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_28638g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_44439g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g43590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09269 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Solyc07g018010.3.1 Solyc07g018010 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g04989 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09017 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 69 172
IPR011598 bHLH_dom 210 253
No external refs found!