Sacu_v1.1_s0110.g020615 (IQD3)


Aliases : IQD3

Description : not classified & original description: CDS=342-1742


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0110.g020615

Target Alias Description ECC score Gene Family Method Actions
AT1G01110 IQD18 IQ-domain 18 0.02 OrthoFinder output from all 47 species
AT2G26410 Iqd4 IQ-domain 4 0.02 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18196 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23783 IQD6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39198 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22740 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37610 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G023100.1 IQD3, Ceric.04G023100 not classified & original description: pacid=50631453... 0.05 OrthoFinder output from all 47 species
Ceric.29G054200.1 iqd2, Ceric.29G054200 not classified & original description: pacid=50625263... 0.03 OrthoFinder output from all 47 species
Dcu_g16921 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24360 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019668001 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025635001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36296 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g02250.1 iqd17, LOC_Os08g02250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20587 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04000 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g31509 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27547 iqd17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29285 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438938 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g10396 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029506_P001 iqd2, Zm00001e029506 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 101 120
IPR025064 DUF4005 388 436
No external refs found!