1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0115.g020941

Sacu_v1.1_s0115.g020941 (ATTAP1, TAP1)


Aliases : ATTAP1, TAP1

Description : subfamily ABCB transporter & original description: CDS=3516-5711


Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0115.g020941

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032404001 ATTAP1, TAP1 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0016070 RNA metabolic process IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 254 434
IPR003439 ABC_transporter-like_ATP-bd 504 652
IPR003890 MIF4G-like_typ-3 25 223
IPR015174 MIF4G-like_typ-2 500 756
IPR015172 MIF4G-like_typ-1 341 464
No external refs found!