Sacu_v1.1_s0117.g021161 (ELI3-2, ATCAD8, CAD-B2, ELI3)


Aliases : ELI3-2, ATCAD8, CAD-B2, ELI3

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor & original description: CDS=1908-2975


Gene families : OG0000208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0117.g021161

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003944001 ELI3-2, ATCAD8,... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 OrthoFinder output from all 47 species
Lfl_g38991 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Nbi_g13430 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013149 ADH-like_C 189 310
IPR013154 ADH-like_N 33 147
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 50 73
IPR002885 Pentatricopeptide_repeat 152 175
No external refs found!