Sacu_v1.1_s0125.g021664


Description : not classified & original description: CDS=1-1812


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0125.g021664
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36510 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t1 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35394.t1 Aspi01Gene35394 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.05 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.04 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.04 OrthoFinder output from all 47 species
Len_g54475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 352 381
IPR002885 Pentatricopeptide_repeat 427 448
IPR002885 Pentatricopeptide_repeat 247 294
IPR002885 Pentatricopeptide_repeat 452 499
IPR002885 Pentatricopeptide_repeat 144 191
No external refs found!