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  5. Sacu_v1.1_s0126.g021703

Sacu_v1.1_s0126.g021703


Description : 2S globulin seed storage protein & original description: CDS=1-1296


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0126.g021703
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g051500 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32400 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55008.t1 Aspi01Gene55008 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55009.t1 Aspi01Gene55009 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68849.t1 Aspi01Gene68849 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68850.t1 Aspi01Gene68850 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.1Z043300.1 Ceric.1Z043300 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z321600.1 Ceric.1Z321600 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29297 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50580 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11736 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29733 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18287 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g30465 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10934 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 178 348
IPR018392 LysM_dom 35 77
IPR018392 LysM_dom 87 129
No external refs found!