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  5. Sacu_v1.1_s0128.g021913

Sacu_v1.1_s0128.g021913 (GATA15)


Aliases : GATA15

Description : transcription factor *(A/B-GATA) & original description: CDS=107-1657


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0128.g021913
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00107710 GATA22, CGA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT2G45050 GATA2 GATA transcription factor 2 0.03 OrthoFinder output from all 47 species
Adi_g010084 GATA22, CGA1, GNL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024585 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g02176 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21776 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20096 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03090 GATA15 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Mp7g03490.1 GATA23 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Msp_g05287 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44006 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07533 GATA15 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17136 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39003 No alias transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20099 GATA15 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 217 250
No external refs found!