Sacu_v1.1_s0129.g021933 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: CDS=1-2328

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0129.g021933

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00119650	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00216p00024260	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00429p00012440	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s01903p00008330	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G17840	ATWBC11, ABCG11,...	white-brown complex homolog protein 11	0.03	OrthoFinder output from all 47 species
Adi_g116530	ATWBC11, ABCG11,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g16818	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g23188	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02591	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06345	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12763	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06733	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12494	ATWBC11, ABCG11,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g12769	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g17529	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene20148.t1	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene63590.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g09671	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04054	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g15896	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01385	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18232	ATWBC11, ABCG11,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os09g29660.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os12g22284.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g01547	D3, CER5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g41025	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g14870.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Msp_g31813	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05443	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g10585	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07568	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g12637	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g25616	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g019760.4.1	ATWBC11, ABCG11,...	suberin/cutin lipid exporter (DSO). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc06g072100.3.1	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g00760	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29213	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51405	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g26365	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g43834	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	127	277
IPR013525	ABC_2_trans	476	682

External Links

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Sacu_v1.1_s0129.g021933 (ATWBC11, ABCG11, DSO,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation