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  5. Sacu_v1.1_s0129.g021978

Sacu_v1.1_s0129.g021978


Description : not classified & original description: CDS=1-2700


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0129.g021978
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g36051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene70663.t1 Aspi01Gene70663 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046677 CRR2 not classified & original description: CDS=1-1557 0.05 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.08 OrthoFinder output from all 47 species
Cba_g05884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45912 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g77536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.05 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14403 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 636 664
IPR002885 Pentatricopeptide_repeat 506 530
IPR002885 Pentatricopeptide_repeat 108 129
IPR002885 Pentatricopeptide_repeat 706 734
IPR002885 Pentatricopeptide_repeat 307 332
IPR002885 Pentatricopeptide_repeat 130 177
IPR002885 Pentatricopeptide_repeat 433 479
IPR002885 Pentatricopeptide_repeat 532 579
IPR002885 Pentatricopeptide_repeat 735 781
IPR002885 Pentatricopeptide_repeat 230 280
No external refs found!