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  5. Sacu_v1.1_s0131.g022124

Sacu_v1.1_s0131.g022124


Description : not classified & original description: CDS=790-1359


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0131.g022124
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00160510 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00072p00034700 evm_27.TU.AmTr_v1... Universal stress protein PHOS32 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G11360 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68300 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g35611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042829 No alias not classified & original description: CDS=1-378 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000836.17 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000443001 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023785001 RD2 No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g57450.1 LOC_Os01g57450 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g17856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431018g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g03351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g006760.3.1 Solyc10g006760 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019620_P001 Zm00001e019620 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 36 186
No external refs found!