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  5. Sacu_v1.1_s0132.g022150

Sacu_v1.1_s0132.g022150


Description : not classified & original description: CDS=51-695


Gene families : OG0000064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0132.g022150

Target Alias Description ECC score Gene Family Method Actions
Aob_g19001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11333 DFR, TT3, M318 not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01027603001 BEN1 Vestitone reductase OS=Medicago sativa 0.01 OrthoFinder output from all 47 species
Pir_g06007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo134883 CCR1, IRX4, ATCCR1 Cell wall.lignin.monolignol synthesis.cinnamoyl-CoA... 0.02 OrthoFinder output from all 47 species
Solyc04g082780.3.1 Solyc04g082780 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Tin_g08728 No alias cinnamoyl-CoA reductase *(CCR) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 33 131
No external refs found!