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  5. Sacu_v1.1_s0132.g022201

Sacu_v1.1_s0132.g022201


Description : not classified & original description: CDS=265-2808


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0132.g022201

Target Alias Description ECC score Gene Family Method Actions
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010912 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076457 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g24411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33579 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18687.t1 Aspi01Gene18687 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54625.t1 Aspi01Gene54625 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007681 No alias not classified & original description: CDS=1-3132 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012909 No alias not classified & original description: CDS=1-2286 0.04 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35188 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G042100.1 EMB2758, Ceric.11G042100 not classified & original description: pacid=50596851... 0.01 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.01 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.01 OrthoFinder output from all 47 species
Ceric.28G027300.1 CRR22, Ceric.28G027300 not classified & original description: pacid=50569783... 0.01 OrthoFinder output from all 47 species
Ceric.29G050000.1 Ceric.29G050000 ssDNA-binding protein *(OSB) & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g483720 No alias Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10909 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39512 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23679 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36053 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021576001 BRCA1, ATBRCA1 DNA damage response.BRCA1–BARD1 DNA-damage response... 0.03 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
LOC_Os05g37225.1 LOC_Os05g37225 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g07400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07844 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.01 OrthoFinder output from all 47 species
Msp_g14854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g26309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g44362 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60394 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g59188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002062 No alias not classified & original description: CDS=1-1716 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003604 No alias not classified & original description: CDS=1-2277 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018718 CRR2 not classified & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020628 No alias not classified & original description: CDS=1-699 0.03 OrthoFinder output from all 47 species
Sam_g11676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23967 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g32428 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 207 256
IPR002885 Pentatricopeptide_repeat 462 485
IPR002885 Pentatricopeptide_repeat 562 585
IPR002885 Pentatricopeptide_repeat 83 106
IPR002885 Pentatricopeptide_repeat 689 735
IPR002885 Pentatricopeptide_repeat 108 153
IPR002885 Pentatricopeptide_repeat 385 432
IPR002885 Pentatricopeptide_repeat 587 635
IPR002885 Pentatricopeptide_repeat 291 333
IPR002885 Pentatricopeptide_repeat 488 533
No external refs found!