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  5. Sacu_v1.1_s0136.g022386

Sacu_v1.1_s0136.g022386


Description : not classified & original description: CDS=98-1027


Gene families : OG0006605 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0136.g022386

Target Alias Description ECC score Gene Family Method Actions
Als_g23641 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g08516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G064500.1 Ceric.15G064500 not classified & original description: pacid=50640277... 0.03 OrthoFinder output from all 47 species
Dde_g13137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018209001 No alias Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species
LOC_Os04g46610.2 LOC_Os04g46610 Probable plastid-lipid-associated protein 11,... 0.02 OrthoFinder output from all 47 species
MA_75636g0010 No alias Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species
Ore_g08873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g018590.2.1 Solyc10g018590 Probable plastid-lipid-associated protein 11,... 0.04 OrthoFinder output from all 47 species
Zm00001e016094_P002 Zm00001e016094 Probable plastid-lipid-associated protein 11,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 53 134
IPR006843 PAP/fibrillin_dom 215 299
No external refs found!