Aliases : ATRBP31, CP31, ATRBP33, RBP31
Description : not classified & original description: CDS=1-768
Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00202090 | evm_27.TU.AmTr_v1... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G53460 | CP29 | chloroplast RNA-binding protein 29 | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene22846.t1 | CP31B, Aspi01Gene22846 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25641.t1 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05227 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007596001 | CP31B | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025697001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01027917001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032361001 | CP31B | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g25960.1 | LOC_Os03g25960 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g50110.1 | LOC_Os04g50110 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g06450.1 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g44290.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g39180.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10051 | ATRBP31, CP31,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_65183g0010 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03561 | CP31B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02206 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_17170V3.1 | Pp3c24_17170 | chloroplast RNA-binding protein 29 | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g006940.4.1 | PDE322, CP33,... | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g111840.3.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086150.2.1 | Solyc10g086150 | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g07686 | ATRBP31, CP31,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001824_P002 | Zm00001e001824 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003947_P001 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022086_P002 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001906 | cell killing | IEP | HCCA |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| BP | GO:0019835 | cytolysis | IEP | HCCA |
| BP | GO:0031640 | killing of cells of another organism | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| CC | GO:0046930 | pore complex | IEP | HCCA |
| BP | GO:0046931 | pore complex assembly | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0051715 | cytolysis in another organism | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| No external refs found! |
