1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0139.g022604

Sacu_v1.1_s0139.g022604


Description : not classified & original description: CDS=40-3546


Gene families : OG0001578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001578_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0139.g022604

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00075430 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g35720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G009200.1 Ceric.29G009200 not classified & original description: pacid=50624594... 0.03 OrthoFinder output from all 47 species
Dde_g43047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g52900.1 LOC_Os01g52900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g08900.1 LOC_Os12g08900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g27875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g12120.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo128017 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc11g005840.2.1 Solyc11g005840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g005860.2.1 Solyc11g005860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021339_P001 Zm00001e021339 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 166 611
IPR000192 Aminotrans_V_dom 1004 1152
No external refs found!