Description : not classified & original description: CDS=48-1829
Gene families : OG0001311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001311_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0144.g022932 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00212620 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.ARID... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027004001 | No alias | RNA biosynthesis.transcriptional activation.ARID... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429133g0010 | No alias | transcription factor (ARID) | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g25840.1 | GYRB3 | transcription factor (ARID) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g049960.4.1 | Solyc05g049960 | transcription factor (ARID) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0031491 | nucleosome binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001606 | ARID_dom | 60 | 132 |
| No external refs found! |
