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  5. Sacu_v1.1_s0147.g023114

Sacu_v1.1_s0147.g023114


Description : not classified & original description: CDS=619-1947


Gene families : OG0001003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0147.g023114
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Als_g02441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023822001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033378001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g14543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012826_P001 Zm00001e012826 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!