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  5. Sacu_v1.1_s0147.g023175

Sacu_v1.1_s0147.g023175


Description : not classified & original description: CDS=1-2640


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0147.g023175
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00220350 OTP85,... Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
Adi_g003297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005739 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013826 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034956 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085794 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102707 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24397 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30900 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17383.t1 OTP84, Aspi01Gene17383 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20496.t1 CRR22, Aspi01Gene20496 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40497.t1 CRR2, Aspi01Gene40497 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41775.t2 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43499.t1 REME1, Aspi01Gene43499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60948.t1 OTP84, Aspi01Gene60948 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008760 No alias not classified & original description: CDS=1-2934 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.04 OrthoFinder output from all 47 species
Azfi_s0405.g068372 No alias not classified & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.04 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.04 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.04 OrthoFinder output from all 47 species
Cba_g07291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13786 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G047700.1 Ceric.02G047700 not classified & original description: pacid=50586056... 0.03 OrthoFinder output from all 47 species
Ceric.06G003600.1 Ceric.06G003600 not classified & original description: pacid=50620322... 0.04 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.10G031500.1 OTP84, Ceric.10G031500 not classified & original description: pacid=50611993... 0.03 OrthoFinder output from all 47 species
Ceric.11G080200.1 Ceric.11G080200 not classified & original description: pacid=50595969... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.03 OrthoFinder output from all 47 species
Ceric.19G075900.1 Ceric.19G075900 not classified & original description: pacid=50576584... 0.03 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.03 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.03 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.03 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.04 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.03 OrthoFinder output from all 47 species
Ceric.30G071500.1 Ceric.30G071500 not classified & original description: pacid=50609206... 0.06 OrthoFinder output from all 47 species
Dac_g03810 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05342 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25739 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009977001 No alias Pentatricopeptide repeat-containing protein At1g43980,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
Len_g02911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18295 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28860 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g43892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59693 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39398 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06887 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10306 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15833 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23561 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004530 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2559 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011812 OTP84 not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019756 No alias not classified & original description: CDS=1-2544 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023499 No alias not classified & original description: CDS=1-1593 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026002 No alias not classified & original description: CDS=74-2389 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0345.g027287 No alias not classified & original description: CDS=1-2001 0.03 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Tin_g05186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05656 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 840 873
IPR002885 Pentatricopeptide_repeat 420 467
IPR002885 Pentatricopeptide_repeat 521 568
IPR002885 Pentatricopeptide_repeat 220 267
IPR002885 Pentatricopeptide_repeat 622 669
IPR002885 Pentatricopeptide_repeat 320 367
IPR002885 Pentatricopeptide_repeat 761 787
IPR002885 Pentatricopeptide_repeat 697 721
IPR002885 Pentatricopeptide_repeat 192 219
IPR002885 Pentatricopeptide_repeat 93 120
IPR002885 Pentatricopeptide_repeat 496 516
IPR002885 Pentatricopeptide_repeat 726 755
IPR002885 Pentatricopeptide_repeat 121 151
No external refs found!