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  5. Sacu_v1.1_s0148.g023237

Sacu_v1.1_s0148.g023237


Description : not classified & original description: CDS=1-2250


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0148.g023237

Target Alias Description ECC score Gene Family Method Actions
Adi_g012988 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03412.t2 Aspi01Gene03412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000167 No alias not classified & original description: CDS=1-1701 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012554 No alias not classified & original description: CDS=1-2283 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031470 No alias not classified & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054648 No alias not classified & original description: CDS=1-843 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Azfi_s0444.g070598 EMB2758 not classified & original description: CDS=1-1605 0.04 OrthoFinder output from all 47 species
Azfi_s0485.g073410 No alias not classified & original description: CDS=1-1641 0.04 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34228 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g04103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15493 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22601 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006421 No alias not classified & original description: CDS=1-675 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011793 OTP84 not classified & original description: CDS=139-2724 0.03 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g045510.4.1 Solyc07g045510 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Tin_g26871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 453 477
IPR002885 Pentatricopeptide_repeat 350 372
IPR002885 Pentatricopeptide_repeat 146 171
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 580 627
IPR002885 Pentatricopeptide_repeat 69 116
IPR002885 Pentatricopeptide_repeat 172 218
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 479 525
IPR002885 Pentatricopeptide_repeat 376 423
No external refs found!