Aliases : ACHT1
Description : atypical thioredoxin *(ACHT) & original description: CDS=160-816
Gene families : OG0000775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000775_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g006897 | ACHT1 | atypical thioredoxin *(ACHT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g47945 | ACHT1 | atypical thioredoxin *(ACHT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05410 | ACHT1 | atypical thioredoxin *(ACHT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10390 | ACHT1 | atypical thioredoxin *(ACHT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25383 | No alias | atypical thioredoxin *(ACHT) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 182 | 210 |
| IPR002885 | Pentatricopeptide_repeat | 598 | 627 |
| IPR002885 | Pentatricopeptide_repeat | 423 | 451 |
| IPR002885 | Pentatricopeptide_repeat | 454 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 524 | 573 |
| IPR002885 | Pentatricopeptide_repeat | 629 | 668 |
| IPR002885 | Pentatricopeptide_repeat | 212 | 260 |
| IPR002885 | Pentatricopeptide_repeat | 279 | 310 |
| IPR013766 | Thioredoxin_domain | 85 | 169 |
| No external refs found! |
