1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0156.g023637

Sacu_v1.1_s0156.g023637 (CDF3)


Aliases : CDF3

Description : transcription factor *(DOF) & original description: CDS=1-1434


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0156.g023637

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00212490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00036p00232310 ADOF2, DOF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g016055 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022624 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079282 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079893 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106333 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11360 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17633 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04342 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01246.t1 Aspi01Gene01246 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34893.t1 OBP4, Aspi01Gene34893 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37574.t1 OBP3, Aspi01Gene37574 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44459.t1 Aspi01Gene44459 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.01 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Cba_g76223 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G043000.1 TMO6, Ceric.39G043000 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g29273 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45363 CDF2 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05429 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31456 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41028 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30636 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01007758001 HCA2, DOF5.6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_28499 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Lfl_g01681 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436933g0020 CDF2 transcription factor (DOF) 0.01 OrthoFinder output from all 47 species
MA_459791g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g15852 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02334 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04824 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28908 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10910 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19752 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e035892_P001 CDF2, Zm00001e035892 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 83 137
No external refs found!