Description : not classified & original description: CDS=112-2235
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00587p00011650 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G52630 | MEF1 | mitochondrial RNAediting factor 1 | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g015809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034338 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067993 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g42176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24411 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17095 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g26992 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g05192 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16353.t1 | Aspi01Gene16353 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55960.t1 | SLO1, Aspi01Gene55960 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61045.t1 | VAC1, ECB2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70275.t1 | Aspi01Gene70275 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene72589.t1 | MEF22, Aspi01Gene72589 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008781 | No alias | not classified & original description: CDS=1-2346 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030697 | No alias | not classified & original description: CDS=1-2361 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0221.g058730 | No alias | not classified & original description: CDS=1-747 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063377 | OTP86 | not classified & original description: CDS=1-2337 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g26660 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g30012 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G042200.1 | Ceric.07G042200 | not classified & original description: pacid=50626031... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G078100.1 | OTP84, Ceric.07G078100 | not classified & original description: pacid=50626860... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.25G047500.1 | Ceric.25G047500 | not classified & original description: pacid=50594463... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.27G070000.1 | Ceric.27G070000 | not classified & original description: pacid=50605490... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08816 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19078 | EMB2261 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g33764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36401 | OTP86 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g38682 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01005260001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01017823001 | No alias | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021576001 | BRCA1, ATBRCA1 | DNA damage response.BRCA1âBARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g08660.1 | LOC_Os06g08660 | Pentatricopeptide repeat-containing protein At4g30700... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g03311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04345 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g47776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06850 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g07795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35930 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g39239 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04889 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g23175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31656 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g33676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34215 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g34233 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27744 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06449 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06978 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003970 | No alias | not classified & original description: CDS=1-3009 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0070.g016681 | No alias | not classified & original description: CDS=1-2460 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11676 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30124 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g32958 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48011 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g50908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo83339 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g095160.3.1 | Solyc01g095160 | Pentatricopeptide repeat-containing protein At4g37170... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114010.3.1 | Solyc03g114010 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g15227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19996 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44852 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 250 | 296 |
| IPR002885 | Pentatricopeptide_repeat | 88 | 134 |
| IPR002885 | Pentatricopeptide_repeat | 351 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 553 | 599 |
| IPR002885 | Pentatricopeptide_repeat | 62 | 87 |
| IPR002885 | Pentatricopeptide_repeat | 527 | 552 |
| IPR002885 | Pentatricopeptide_repeat | 451 | 501 |
| No external refs found! |
