Sacu_v1.1_s0160.g023889


Description : not classified & original description: CDS=72-500


Gene families : OG0008654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008654_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0160.g023889
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250250 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g21632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32025.t1 Aspi01Gene32025 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0258.g060616 No alias not classified & original description: CDS=67-678 0.04 OrthoFinder output from all 47 species
Cba_g31593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51639 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01034135001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g01950.1 LOC_Os05g01950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g04457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_1640g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g37811 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g09229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_5420V3.1 Pp3c3_5420 No annotation 0.01 OrthoFinder output from all 47 species
Solyc10g086570.3.1 Solyc10g086570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g16102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!