Sacu_v1.1_s0162.g023979 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR) & original description: CDS=161-3523


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0162.g023979

Target Alias Description ECC score Gene Family Method Actions
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.04 OrthoFinder output from all 47 species
Adi_g003873 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Als_g21344 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G074400.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01017487001 TPL, WSIP1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
Ppi_g29475 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e040187_P001 TPR1, Zm00001e040187 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 18 101
IPR001680 WD40_repeat 455 489
IPR001680 WD40_repeat 910 942
No external refs found!