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  5. Sacu_v1.1_s0164.g024060

Sacu_v1.1_s0164.g024060


Description : not classified & original description: CDS=1-2526


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0164.g024060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00177680 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00219990 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00023570 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g009423 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013826 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g041239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g097219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097872 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39842 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024817 No alias not classified & original description: CDS=20-3643 0.05 OrthoFinder output from all 47 species
Azfi_s0138.g051109 No alias not classified & original description: CDS=1-2523 0.05 OrthoFinder output from all 47 species
Cba_g02672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27524 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45877 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Ceric.23G076700.1 OTP84, Ceric.23G076700 not classified & original description: pacid=50610256... 0.03 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.30G017600.1 Ceric.30G017600 not classified & original description: pacid=50608172... 0.02 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.03 OrthoFinder output from all 47 species
Dac_g00755 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06433 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06831 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08876 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43122 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47764 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11227 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25739 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.05 OrthoFinder output from all 47 species
GSVIVT01033190001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species
Gb_17916 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
LOC_Os11g29230.1 CRR22, LOC_Os11g29230 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g07979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37667 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426444g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_217g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21727 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27720 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44362 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc02g081900.4.1 OTP84, Solyc02g081900 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Solyc11g017370.3.1 Solyc11g017370 RNA editing factor (AEF1) 0.06 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25259 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26143 MEF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53265 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55598 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 163 209
IPR002885 Pentatricopeptide_repeat 265 312
IPR002885 Pentatricopeptide_repeat 469 515
IPR002885 Pentatricopeptide_repeat 571 616
IPR002885 Pentatricopeptide_repeat 61 107
IPR002885 Pentatricopeptide_repeat 366 413
IPR002885 Pentatricopeptide_repeat 673 720
IPR002885 Pentatricopeptide_repeat 239 264
IPR002885 Pentatricopeptide_repeat 746 771
No external refs found!