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  5. Sacu_v1.1_s0167.g024191

Sacu_v1.1_s0167.g024191


Description : not classified & original description: CDS=4-1452


Gene families : OG0001844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0167.g024191

Target Alias Description ECC score Gene Family Method Actions
Aev_g38176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07148 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene10130.t1 Aspi01Gene10130 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38540.t1 Aspi01Gene38540 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38541.t1 Aspi01Gene38541 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G034900.1 Ceric.20G034900 not classified & original description: pacid=50567097... 0.04 OrthoFinder output from all 47 species
Dcu_g47988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06582 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g40489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA Interproscan
BP GO:0009664 plant-type cell wall organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 301 357
IPR006706 Extensin_dom 381 424
IPR006706 Extensin_dom 357 404
IPR006706 Extensin_dom 286 329
IPR006706 Extensin_dom 396 452
No external refs found!