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  5. Sacu_v1.1_s0170.g024366

Sacu_v1.1_s0170.g024366


Description : component *(uS9) of small ribosomal-subunit (SSU) proteome & original description: CDS=1-486


Gene families : OG0002224 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0170.g024366

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00076360 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Cre13.g573351 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01031714001 No alias 40S ribosomal protein S16-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05712 No alias component RPS16 of SSU proteome 0.04 OrthoFinder output from all 47 species
Gb_29914 No alias component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os11g03400.1 LOC_Os11g03400 component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os12g03090.1 LOC_Os12g03090 component RPS16 of SSU proteome 0.04 OrthoFinder output from all 47 species
Len_g38666 No alias component *(uS9) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Mp1g07720.1 No alias component RPS16 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c19_22410V3.1 Pp3c19_22410 Ribosomal protein S5 domain 2-like superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c21_20630V3.1 Pp3c21_20630 Ribosomal protein S5 domain 2-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g19273 No alias component *(uS9) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo138369 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g068530.3.1 Solyc01g068530 component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc05g005690.1.1 Solyc05g005690 component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e009230_P001 Zm00001e009230 component RPS16 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e020865_P003 Zm00001e020865 component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 11 142
No external refs found!