1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0171.g024374

Sacu_v1.1_s0171.g024374


Description : not classified & original description: CDS=151-678


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0171.g024374
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00168190 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g21741 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g32680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66341.t1 Aspi01Gene66341 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035831 No alias not classified & original description: CDS=355-885 0.05 OrthoFinder output from all 47 species
Dcu_g17856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015508001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01023260001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426034g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10426708g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_15220g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_34359g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7437g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_814986g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9005842g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9349606g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9550254g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30062 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013483 No alias not classified & original description: CDS=659-1114 0.04 OrthoFinder output from all 47 species
Sam_g11459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g006640.2.1 Solyc12g006640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035745_P001 Zm00001e035745 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 11 130
No external refs found!