Aliases : AtGH9C3, GH9C3
Description : class-C endo-1,4-beta-glucanase & original description: CDS=1-1848
Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0175.g024541 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19940 | AtGH9B5, GH9B5 | glycosyl hydrolase 9B5 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62195 | GH9C2, AtGH9C2 | class-C endo-1,4-beta-glucanase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63529 | GH9C2, AtGH9C2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| MF | GO:0030246 | carbohydrate binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
| No external refs found! |
