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  5. Sacu_v1.1_s0175.g024554

Sacu_v1.1_s0175.g024554


Description : not classified & original description: CDS=1-1890


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0175.g024554

Target Alias Description ECC score Gene Family Method Actions
AT5G48800 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Als_g03145 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aob_g11100 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g10641 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43240.t1 Aspi01Gene43240 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62872.t1 Aspi01Gene62872 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cba_g03271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05247 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Cba_g17052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G013500.1 Ceric.37G013500 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Dac_g10415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05719 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Dcu_g13792 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Dde_g23638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22600.1 LOC_Os03g22600 BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Len_g15180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092610.3.1 Solyc02g092610 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g061250.4.1 Solyc09g061250 BTB/POZ domain-containing protein At5g48800... 0.04 OrthoFinder output from all 47 species
Spa_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 218 481
No external refs found!