Description : ribosome biogenesis factor *(CRASS) & original description: CDS=109-642
Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0180.g024792 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00224760 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT5G14910 | No alias | Heavy metal transport/detoxification superfamily protein | 0.14 | OrthoFinder output from all 47 species | |
| Aev_g02821 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g13367 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g04787 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060247 | No alias | ribosome biogenesis factor *(CRASS) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g09614 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G033000.1 | Ceric.01G033000 | ribosome biogenesis factor *(CRASS) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g12212 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36209 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05290 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032527001 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| Gb_22864 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g27100.1 | LOC_Os05g27100 | ribosome biogenesis factor (CRASS) | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g37391 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_59576g0010 | No alias | ribosome biogenesis factor (CRASS) | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g04290.1 | No alias | ribosome biogenesis factor (CRASS) | 0.17 | OrthoFinder output from all 47 species | |
| Msp_g44058 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44614 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05841 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_25290V3.1 | Pp3c1_25290 | Heavy metal transport/detoxification superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00577 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g13302 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g087150.3.1 | Solyc02g087150 | ribosome biogenesis factor (CRASS) | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g10440 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e031534_P001 | Zm00001e031534 | ribosome biogenesis factor (CRASS) | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042802 | identical protein binding | IEP | HCCA |
| MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0060590 | ATPase regulator activity | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
