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  5. Sacu_v1.1_s0182.g024898

Sacu_v1.1_s0182.g024898 (UBP23)


Aliases : UBP23

Description : not classified & original description: CDS=166-2922


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0182.g024898
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G17110 UBP15 ubiquitin-specific protease 15 0.03 OrthoFinder output from all 47 species
Adi_g007364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013897 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060737 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54061.t1 UBP23, Aspi01Gene54061 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.8 UBP25 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.46 DRP3B Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Dcu_g08851 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10800 UBP23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19483 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g14730.1 UBP15, LOC_Os02g14730 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Len_g01378 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
MA_717g0010 UBP19 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Ore_g09620 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24151 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05909 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012859 UBP18 not classified & original description: CDS=628-2634 0.03 OrthoFinder output from all 47 species
Sam_g04367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g076210.3.1 UBP16, Solyc04g076210 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 138 440
IPR002740 EVE_domain 766 897
No external refs found!