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  5. Sacu_v1.1_s0183.g024918

Sacu_v1.1_s0183.g024918 (SPL5)


Aliases : SPL5

Description : SBP-type transcription factor & original description: CDS=1-1335


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0183.g024918

Target Alias Description ECC score Gene Family Method Actions
Adi_g011545 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08296 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57316.t1 SPL2, Aspi01Gene57316 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g10833 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g335150 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Dac_g11125 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02629 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
MA_10049111g0010 SPL7, ATSPL7 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Ore_g10920 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 129 202
No external refs found!