Sacu_v1.1_s0183.g024932


Description : not classified & original description: CDS=1-213


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0183.g024932

Target Alias Description ECC score Gene Family Method Actions
AT2G19310 No alias HSP20-like chaperones superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g18124 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015012 HSP18.2 not classified & original description: CDS=304-735 0.03 OrthoFinder output from all 47 species
Ceric.1Z202900.1 HSP18.2, Ceric.1Z202900 not classified & original description: pacid=50582238... 0.02 OrthoFinder output from all 47 species
Ceric.1Z203100.1 HSP18.2, Ceric.1Z203100 not classified & original description: pacid=50582237... 0.02 OrthoFinder output from all 47 species
Ceric.1Z203200.1 HSP18.2, Ceric.1Z203200 not classified & original description: pacid=50582241... 0.02 OrthoFinder output from all 47 species
Ceric.24G037800.1 HSP18.2, Ceric.24G037800 not classified & original description: pacid=50628638... 0.02 OrthoFinder output from all 47 species
Ceric.24G037900.1 HSP18.2, Ceric.24G037900 not classified & original description: pacid=50629135... 0.02 OrthoFinder output from all 47 species
Ceric.24G038100.1 HSP18.2, Ceric.24G038100 not classified & original description: pacid=50629886... 0.02 OrthoFinder output from all 47 species
Ceric.24G038200.1 HSP18.2, Ceric.24G038200 not classified & original description: pacid=50629770... 0.02 OrthoFinder output from all 47 species
Ceric.24G038300.1 HSP18.2, Ceric.24G038300 not classified & original description: pacid=50628769... 0.02 OrthoFinder output from all 47 species
Dcu_g14926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26468 ATHSP22.0 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!