Aliases : HY4, ATCRY1, BLU1, OOP2, CRY1
Description : cryptochrome photoreceptor *(CRY) & original description: CDS=7-2436
Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0187.g025130 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp2g17590.1 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | HCCA |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 168 | 184 |
| IPR002885 | Pentatricopeptide_repeat | 94 | 138 |
| IPR002885 | Pentatricopeptide_repeat | 20 | 52 |
| IPR002885 | Pentatricopeptide_repeat | 56 | 87 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 182 |
| IPR002885 | Pentatricopeptide_repeat | 44 | 93 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 231 |
| IPR002885 | Pentatricopeptide_repeat | 5 | 37 |
| IPR006050 | DNA_photolyase_N | 5 | 159 |
| IPR005101 | Cryptochr/Photolyase_FAD-bd | 283 | 481 |
| No external refs found! |
