Sacu_v1.1_s0188.g025161 (VAC1, ECB2, ATECB2)

Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: CDS=657-2828

Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0188.g025161

Target	Alias	Description	ECC score	Gene Family Method	Actions
Adi_g015952	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005530	CRR22	not classified & original description: CDS=1-2547	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	649	717
IPR002885	Pentatricopeptide_repeat	79	102
IPR002885	Pentatricopeptide_repeat	283	308
IPR046848	E_motif	529	576
IPR002885	Pentatricopeptide_repeat	105	151
IPR002885	Pentatricopeptide_repeat	309	356
IPR002885	Pentatricopeptide_repeat	410	459
IPR002885	Pentatricopeptide_repeat	208	254

External Links

No external refs found!