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  5. Sacu_v1.1_s0191.g025297

Sacu_v1.1_s0191.g025297 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: CDS=1-2148


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0191.g025297

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.02 OrthoFinder output from all 47 species
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.05 OrthoFinder output from all 47 species
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.02 OrthoFinder output from all 47 species
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.03 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 OrthoFinder output from all 47 species
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.05 OrthoFinder output from all 47 species
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.04 OrthoFinder output from all 47 species
Adi_g105581 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05813 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g24639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20300.t1 ATCNGC20,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70565.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063721 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Cba_g13170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G070300.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ceric.23G068600.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ceric.37G059700.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g07103 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Dcu_g03033 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029407001 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
LOC_Os06g08850.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os06g33570.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Len_g30634 ATCNGC17, CNGC17 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Msp_g15424 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Msp_g26614 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05274 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc03g098210.4.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc05g050380.4.1 ATCNGC13,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc07g005590.3.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc07g006510.3.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Spa_g00978 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Spa_g10308 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Tin_g02085 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Tin_g03478 ATCNGC8, CNGC8 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Zm00001e011591_P002 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e034885_P002 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 104 438
No external refs found!