Sacu_v1.1_s0191.g025310 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: CDS=6-2411

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0191.g025310
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AT2G28070	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT3G21090	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Ala_g25229	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15684	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36347.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g11275	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10436774g0020	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Msp_g14599	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g21500	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17205	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10384	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	167	318
IPR043926	ABCG_dom	347	403
IPR013525	ABC_2_trans	619	700
IPR013525	ABC_2_trans	483	561

External Links

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