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  5. Sacu_v1.1_s0192.g025356

Sacu_v1.1_s0192.g025356 (EDA3)


Aliases : EDA3

Description : component *(RPP30/POP2) of RNA-dependent RNase P complex & original description: CDS=2106-2828


Gene families : OG0006306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0192.g025356

Target Alias Description ECC score Gene Family Method Actions
AT2G34860 EDA3 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g00346 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046423 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.281 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.29 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Cre11.g475850 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dde_g15497 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g11512 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002738 RNase_P_p30 12 245
No external refs found!