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  5. Sacu_v1.1_s0194.g025411

Sacu_v1.1_s0194.g025411


Description : not classified & original description: CDS=1-1239


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0194.g025411
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Aob_g11016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58701.t1 Aspi01Gene58701 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64303.t1 Aspi01Gene64303 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07245 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 70 176
No external refs found!