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  5. Sacu_v1.1_s0194.g025421

Sacu_v1.1_s0194.g025421


Description : not classified & original description: CDS=1-1638


Gene families : OG0000171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000171_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0194.g025421
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Len_g13189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010199 No alias not classified & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1239.g027972 No alias not classified & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR009880 Glyoxal_oxidase_N 19 269
IPR015202 GO-like_E_set 439 541
No external refs found!