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  5. Sacu_v1.1_s0202.g025640

Sacu_v1.1_s0202.g025640


Description : not classified & original description: CDS=1168-1596


Gene families : OG0001477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0202.g025640

Target Alias Description ECC score Gene Family Method Actions
Adi_g013322 No alias solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23637 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40508.t1 Aspi01Gene40508 solute transporter *(TPPT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45795 No alias solute transporter *(TPPT) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g74979 No alias solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G087500.1 Ceric.11G087500 solute transporter *(TPPT) & original description:... 0.06 OrthoFinder output from all 47 species
GSVIVT01033819001 No alias Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
LOC_Os09g33830.1 LOC_Os09g33830 solute transporter (TPPT) 0.03 OrthoFinder output from all 47 species
Lfl_g15825 No alias solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09275 No alias solute transporter *(TPPT) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19500 No alias solute transporter *(TPPT) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27081 No alias solute transporter *(TPPT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52497 No alias solute transporter *(TPPT) & original description: none 0.06 OrthoFinder output from all 47 species
Smo402781 No alias Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
Spa_g21653 No alias solute transporter *(TPPT) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53005 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07030 No alias solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009262 SLC35_F1/F2/F6 55 134
No external refs found!