Sacu_v1.1_s0204.g025692 (ARF10)

Aliases : ARF10

Description : ARF-type transcription factor & original description: CDS=854-2743

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0204.g025692
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00157690	ARF6,...	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
Adi_g054964	ARF16	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g068596	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g103241	TIR5, MSG1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02130	ARF16	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27966	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene11714.t1	ARF6, Aspi01Gene11714	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene38983.t1	ARF16, Aspi01Gene38983	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46203.t2	ARF1, Aspi01Gene46203	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46204.t1	ARF1, Aspi01Gene46204	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene51864.t1	ARF16, Aspi01Gene51864	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene55123.t1	ARF6, Aspi01Gene55123	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61150.t1	ARF16, Aspi01Gene61150	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.30G022300.1	ARF6, Ceric.30G022300	ARF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g31924	ARF1	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g17078	ARF16	ARF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g12286	ARF10	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01032251001	ARF19, IAA22, ARF11	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
Gb_15247	HSS, ARF1-BP, ARF2, ORE14	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
LOC_Os12g41950.1	ARF6, LOC_Os12g41950	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Len_g10088	ARF10	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_85955g0020	ARF19, IAA22, ARF11	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Mp1g12750.1	ARF6	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Pir_g29453	ARF1	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25925	ARF16	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g016180.3.1	ARF19, IAA22,...	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Spa_g26009	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013639_P001	ARF19, IAA22,...	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Zm00001e030325_P003	ARF6, Zm00001e030325	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species
Zm00001e032423_P002	ARF3, ETT, Zm00001e032423	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004664	prephenate dehydratase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006558	L-phenylalanine metabolic process	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	HCCA
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	HCCA
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0072488	ammonium transmembrane transport	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	HCCA
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010525	ARF_dom	298	383
IPR003340	B3_DNA-bd	146	248

External Links

No external refs found!

Sacu_v1.1_s0204.g025692 (ARF10)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation