1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0220.g026168

Sacu_v1.1_s0220.g026168 (GR-RBP3)


Aliases : GR-RBP3

Description : RNA editing factor *(ORRM3) & original description: CDS=1-420


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0220.g026168
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016847 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016848 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022574 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040241 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053659 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068967 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106770 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107607 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28477 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07993 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44798 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06469 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00926 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29612 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04821 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14006 ATRZ-1A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31532 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44420 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02153 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06304 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21776 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09025 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14516 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11735 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13819 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06624 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00490 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10436 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33177 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17461 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09617 No alias RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09618 No alias RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10757 No alias RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04956 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41354 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 32 102
No external refs found!