Aliases : ATSS3, SS3
Description : starch synthase *(SS3) & original description: CDS=271-2166
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0222.g026242 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00037p00164200 | ATSS3, SS3,... | Carbohydrate metabolism.starch... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086856 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12175 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18951 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g18815 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g19480 | ATSS4, SS4, SSIV | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_37508 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15562 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g09774 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12029 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12030 | No alias | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g071040.3.1 | ATSS4, SS4,... | starch synthase (SSIV) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:2001070 | starch binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| No external refs found! |
