1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0224.g026295

Sacu_v1.1_s0224.g026295 (REME1)


Aliases : REME1

Description : not classified & original description: CDS=1-1695


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0224.g026295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Aob_g23363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34731.t1 Aspi01Gene34731 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36332.t1 Aspi01Gene36332 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36332.t2 Aspi01Gene36332 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0349.g066524 No alias ssDNA-binding protein *(OSB) & original description: CDS=117-392 0.07 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Msp_g19707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo134463 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 230 252
IPR002885 Pentatricopeptide_repeat 330 356
IPR046848 E_motif 373 436
IPR002885 Pentatricopeptide_repeat 151 201
IPR002885 Pentatricopeptide_repeat 256 303
IPR032867 DYW_dom 472 563
No external refs found!