Aliases : CRR22
Description : ssDNA-binding protein *(OSB) & original description: CDS=95-2287
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G62890 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G31070 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33990 | EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003816 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059864 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10387 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16565 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16840 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24232 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g38211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16691 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g33022 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34733.t1 | Aspi01Gene34733 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0127.g048709 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2400 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0731.g084096 | No alias | not classified & original description: CDS=1-3909 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1395.g102559 | No alias | not classified & original description: CDS=1-912 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s3922.g117339 | No alias | not classified & original description: CDS=1-831 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14131 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19915 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34536 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g42618 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G035800.1 | Ceric.05G035800 | not classified & original description: pacid=50577834... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G026400.1 | Ceric.07G026400 | not classified & original description: pacid=50626353... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G076100.1 | Ceric.19G076100 | not classified & original description: pacid=50575482... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G056200.1 | Ceric.28G056200 | not classified & original description: pacid=50570685... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G081200.1 | OTP86, Ceric.29G081200 | not classified & original description: pacid=50624479... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43504 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g45949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02940 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04371 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09537 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15722 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g20970 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22366 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28150 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g39554 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g42048 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g49993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05135 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54971 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39249 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g06422 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15576 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17452 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46073 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48107 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05873 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07991 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g20274 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06420 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12406 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06218 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30631 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05936 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07588 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12807 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g21699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g36011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g40150 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g45723 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g49399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53191 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53375 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53937 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07204 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g38689 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23704 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g16966 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 204 | 229 |
| IPR002885 | Pentatricopeptide_repeat | 582 | 607 |
| IPR002885 | Pentatricopeptide_repeat | 278 | 300 |
| IPR002885 | Pentatricopeptide_repeat | 304 | 350 |
| IPR002885 | Pentatricopeptide_repeat | 608 | 653 |
| IPR002885 | Pentatricopeptide_repeat | 505 | 551 |
| IPR002885 | Pentatricopeptide_repeat | 405 | 451 |
| IPR002885 | Pentatricopeptide_repeat | 674 | 705 |
| No external refs found! |
