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  5. Sacu_v1.1_s0243.g026662

Sacu_v1.1_s0243.g026662


Description : not classified & original description: CDS=264-2522


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0243.g026662

Target Alias Description ECC score Gene Family Method Actions
Adi_g080993 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27844 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008405 No alias not classified & original description: CDS=233-2125 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.02 OrthoFinder output from all 47 species
Cba_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G103800.1 Ceric.04G103800 not classified & original description: pacid=50630749... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g22525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023818001 CRR28 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Len_g44142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo182822 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0015918 sterol transport IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032366 intracellular sterol transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 281
IPR002885 Pentatricopeptide_repeat 344 365
IPR002885 Pentatricopeptide_repeat 155 179
IPR002885 Pentatricopeptide_repeat 640 669
IPR002885 Pentatricopeptide_repeat 511 535
IPR002885 Pentatricopeptide_repeat 612 632
IPR002885 Pentatricopeptide_repeat 84 112
IPR002885 Pentatricopeptide_repeat 540 569
IPR002885 Pentatricopeptide_repeat 707 729
IPR002885 Pentatricopeptide_repeat 465 495
IPR002885 Pentatricopeptide_repeat 183 228
IPR002885 Pentatricopeptide_repeat 285 328
No external refs found!